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bash add chr to beginning of vcf Code Example
bash add chr to beginning of vcf 
# Example usage:
awk '{if($0 !~ /^#/) print "chr"$0; else print $0}' input.vcf
# This converts a vcf file with numeric genome coordinates to one with 
# chr in front of the chromosome number. 

# Note, this command does the opposite operation, if needed:
awk '{gsub(/^chr/,""); print}' input.vcf
Source: www.biostars.org



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Type:
 Code Example
Category:
 Coding
Sub Category:
 Code Example
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